Imperial College London

ProfessorBorisLenhard

Faculty of MedicineInstitute of Clinical Sciences

Professor of Computational Biology
 
 
 
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Contact

 

+44 (0)20 3313 8353b.lenhard Website

 
 
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Assistant

 

Mr Alastair Douglas Ivor Williams +44 (0)20 3313 4318

 
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Location

 

230ICTEM buildingHammersmith Campus

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Summary

 

Publications

Citation

BibTex format

@article{Barešić:2020:10.1038/s41380-019-0518-x,
author = {Barei, A and Nash, AJ and Dahoun, T and Howes, O and Lenhard, B},
doi = {10.1038/s41380-019-0518-x},
journal = {Mol Psychiatry},
pages = {6--18},
title = {Understanding the genetics of neuropsychiatric disorders: the potential role of genomic regulatory blocks.},
url = {http://dx.doi.org/10.1038/s41380-019-0518-x},
volume = {25},
year = {2020}
}

RIS format (EndNote, RefMan)

TY  - JOUR
AB - Recent genome-wide association studies have identified numerous loci associated with neuropsychiatric disorders. The majority of these are in non-coding regions, and are commonly assigned to the nearest gene along the genome. However, this approach neglects the three-dimensional organisation of the genome, and the fact that the genome contains arrays of extremely conserved non-coding elements termed genomic regulatory blocks (GRBs), which can be utilized to detect genes under long-range developmental regulation. Here we review a GRB-based approach to assign loci in non-coding regions to potential target genes, and apply it to reanalyse the results of one of the largest schizophrenia GWAS (SWG PGC, 2014). We further apply this approach to GWAS data from two related neuropsychiatric disorders-autism spectrum disorder and bipolar disorder-to show that it is applicable to developmental disorders in general. We find that disease-associated SNPs are overrepresented in GRBs and that the GRB model is a powerful tool for linking these SNPs to their correct target genes under long-range regulation. Our analysis identifies novel genes not previously implicated in schizophrenia and corroborates a number of predicted targets from the original study. The results are available as an online resource in which the genomic context and the strength of enhancer-promoter associations can be browsed for each schizophrenia-associated SNP.
AU - Barei,A
AU - Nash,AJ
AU - Dahoun,T
AU - Howes,O
AU - Lenhard,B
DO - 10.1038/s41380-019-0518-x
EP - 18
PY - 2020///
SP - 6
TI - Understanding the genetics of neuropsychiatric disorders: the potential role of genomic regulatory blocks.
T2 - Mol Psychiatry
UR - http://dx.doi.org/10.1038/s41380-019-0518-x
UR - https://www.ncbi.nlm.nih.gov/pubmed/31616042
VL - 25
ER -