I study the interaction of epidemiological dynamics and evolution of pathogens. The aim of this work is to improve surveillance of infectious diseases using molecular data. I also study the role of social and sexual networks in mediating the spread of infectious diseases.
I have a substantive focus on HIV/AIDS. Recent work has focused on the development of better methods for estimating HIV incidence, transmission rates, and behavioral heterogeneity of populations at risk of HIV.
I have graduate training in sociology and mathematics (Cornell University) and postdoctoral training in HIV research (University of California- San Diego). I recently completed a NIH career development fellowship focused on the development of methods for molecular epidemiological surveillance of HIV (University of Michigan- Ann Arbor).
et al., 2013, Inferring the Source of Transmission with Phylogenetic Data, Plos Computational Biology, Vol:9, ISSN:1553-7358, Pages:e1003397-e1003397
et al., 2013, HIV-1 Transmission during Early Infection in Men Who Have Sex with Men: A Phylodynamic Analysis, Plos Medicine, Vol:10, ISSN:1549-1676, Pages:e1001568-12
et al., 2008, SIR dynamics in random networks with heterogeneous connectivity, Journal of Mathematical Biology, Vol:56, ISSN:0303-6812, Pages:293-310
et al., 2007, Susceptible-infected-recovered epidemics in dynamic contact networks, Proceedings of the Royal Society B: Biological Sciences, Vol:274, ISSN:0962-8452, Pages:2925-2933
et al., 2009, Phylodynamics of Infectious Disease Epidemics, Genetics, Vol:183, ISSN:0016-6731, Pages:1421-1430
et al., 2012, Complex Population Dynamics and the Coalescent Under Neutrality, Genetics, Vol:190, ISSN:0016-6731, Pages:187-U311
et al., 2012, Simple Epidemiological Dynamics Explain Phylogenetic Clustering of HIV from Patients with Recent Infection, PLOS Computational Biology, Vol:8, ISSN:1553-734X, Pages:e1002552-e1002552
et al., 2013, Viral Phylodynamics, Plos Computational Biology, Vol:9, ISSN:1553-7358, Pages:e1002947-e1002947