Dr Ibrahim Emam

Faculty of Medicine, National Heart & Lung Institute

Research Associate

Contact

Location

William Penney LaboratorySouth Kensington Campus

Summary

Ibrahim Emam is a Research Associate leading the development of translational medicine data management platform (PlatformTM). Before that he was a senior software engineer at the Functional Genomics group at the European Bioinformatics Institute developing the Gene Expression Atlas and ArrayExpress2. He received his PhD in Research Data Management from Imperial College and his MSc in Bioinformatics from the University of Oxford and his double major BSc in Computer Science and Biology from the American University in Cairo Egypt. His research interests are bioinformatics application design and development, large scale biomedical data management and analysis, data standardization, modeling and visualisation.

Publications

Journals

Rocca-Serra P, Gu W, Ioannidis V, et al.Rocca-Serra P, Gu W, Ioannidis V, Abbassi-Daloii T, Capella-Gutierrez S, Chandramouliswaran I, Splendiani A, Burdett T, Giessmann R, Henderson D, Batista D, Emam I, Gadiya Y, Giovanni L, Willighagen E, Evelo C, Gray AJG, Gribbon P, Juty N, Welter D, Quast K, Peeters P, Plasterer T, Wood C, van der Horst E, Reilly D, van Vlijmen H, Scollen S, Lister A, Thurston M, Granell R, FAIR CC, Sanson S-A close, 2023, The FAIR Cookbook-the essential resource for and by FAIR doers, Scientific Data, Vol:10

Welter D, Juty N, Rocca-Serra P, et al.Welter D, Juty N, Rocca-Serra P, Xu F, Henderson D, Gu W, Strubel J, Giessmann RT, Emam I, Gadiya Y, Abbassi-Daloii T, Alharbi E, Gray AJG, Courtot M, Gribbon P, Ioannidis V, Reilly DS, Lynch N, Boiten J-W, Satagopam V, Goble C, Sansone S-A, Burdett T close, 2023, FAIR in action-a flexible framework to guide FAIRification, Scientific Data, Vol:10

Emam I, Elyasigomari V, Matthews A, et al.Emam I, Elyasigomari V, Matthews A, Pavlidis S, Rocca-Serra P, Guitton F, Verbeeck D, Grainger L, Borgogni E, Del Giudice G, Saqi M, Houston P, Guo Y close, 2019, PlatformTM, a standards-based data custodianship platform for translational medicine research., Scientific Data, Vol:6, ISSN:2052-4463, Pages:149-149

Wang S, Pandis I, Johnson D, et al.Wang S, Pandis I, Johnson D, Emam I, Guitton F, Oehmichen A, Guo Y close, 2014, Optimising Correlation Matrix Calculations on Gene Expression Data, Bmc Bioinformatics, Vol:15, ISSN:1471-2105

Conference

Oehmichen A, Guitton F, Agapow P, et al.Oehmichen A, Guitton F, Agapow P, Emam I, Guo Y close, 2018, A multi-tenant computational platform for translational medicine, 38th IEEE International Conference on Distributed Computing Systems (ICDCS), IEEE, Pages:1553-1556, ISSN:1063-6927

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