DrTimothyEbbels

Faculty of Medicine, Department of Surgery & Cancer

Reader in Computational Bioinformatics

Contact

Location

131Sir Alexander Fleming BuildingSouth Kensington Campus

Summary

I am a Reader within the Computational and Systems Medicine Section of the Department of Surgery and Cancer. My overall research interests lie at the interface between two broad areas:

multivariate data analysis,

and

post-genomic technologies.

More specifically, on the computational side these include, machine learning, bioinformatics, chemometrics, and multivariate statistics, and on the experimental side, the fields of genomics, transcriptomics and metabolomics. I am interested in applying diverse computational and mathematical methods in order to disentangle the mass of information at multiple biological levels generated by the –omics technologies. The ultimate aim is to synthesise the information provided by each of these techniques, thus facilitating a multi-scale understanding of biological systems. This broad aim leads to several themes in my current research:

Improving information extraction from Nuclear Magnetic Resonance (NMR) spectroscopy & Liquid Chromatography–Mass Spectrometry (LC-MS) metabolic profiles
Novel methods for predictive modelling of post-genomic data
Statistical association networks as complex phenotypes in post-genomics
Statistical integration and visualisation of metabolic profiles with other post-genomic data
Time series analysis of post-genomic data

Current projects are detailed on my Research page.

teaching

Dr Tim Ebbels introduces the Biomedical Research stream of the MRes in Biomedical Research

medicine, postgraduate study, biomedical, teaching

Publications

Journals

Chan Q, Loo RL, Ebbels TMD, et al.Chan Q, Loo RL, Ebbels TMD, Van Horn L, Daviglus ML, Stamler J, Nicholson JK, Holmes E, Elliott P, Chan Q, Loo RL, Ebbels TM, Van Horn L, Daviglus ML, Stamler J, Nicholson JK, Holmes E, Elliott P, Chan Q, Loo RL, Ebbels TMD, Van Horn L, Daviglus ML, Stamler J, Nicholson JK, Holmes E, Elliott P, Chan Q, Loo RL, Ebbels TMD, Van Horn L, Daviglus ML, Stamler J, Nicholson JK, Holmes E, Elliott P, Chan Q, Loo RL, Ebbels TMD, Van Horn L, Daviglus ML, Stamler J, Nicholson JK, Holmes E, Elliott P, Chan Q, Loo RL, Ebbels TMD, Van Horn L, Daviglus ML, Stamler J, Nicholson JK, Holmes E, Elliott P close, 2017, Metabolic phenotyping for discovery of urinary biomarkers of diet, xenobiotics and blood pressure in the INTERMAP Study: an overview, Hypertension Research, Vol:40, ISSN:0916-9636, Pages:336-345

Weber RJM, Lawson TN, Salek RM, et al.Weber RJM, Lawson TN, Salek RM, Ebbels TMD, Glen RC, Goodacre R, Griffin JL, Haug K, Koulman A, Moreno P, Ralser M, Steinbeck C, Dunn WB, Viant MR, Weber RJM, Lawson TN, Salek RM, Ebbels TMD, Glen RC, Goodacre R, Griffin JL, Haug K, Koulman A, Moreno P, Ralser M, Steinbeck C, Dunn WB, Viant MR, Weber RJM, Lawson TN, Salek RM, Ebbels TMD, Glen RC, Goodacre R, Griffin JL, Haug K, Koulman A, Moreno P, Ralser M, Steinbeck C, Dunn WB, Viant MR, Weber RJM, Lawson TN, Salek RM, Ebbels TMD, Glen RC, Goodacre R, Griffin JL, Haug K, Koulman A, Moreno P, Ralser M, Steinbeck C, Dunn WB, Viant MR, Weber RJM, Lawson TN, Salek RM, Ebbels TMD, Glen RC, Goodacre R, Griffin JL, Haug K, Koulman A, Moreno P, Ralser M, Steinbeck C, Dunn WB, Viant MR, Weber RJM, Lawson TN, Salek RM, Ebbels TMD, Glen RC, Goodarce R, Griffin JL, Haug K, Koulman A, Moreno P, Ralser M, Steinbeck C, Dunn WB, Viant MR close, 2017, Computational tools and workflows in metabolomics: An international survey highlights the opportunity for harmonisation through Galaxy, Metabolomics, Vol:13, ISSN:1573-3882

Blaise BJ, Correia G, Tin A, et al.Blaise BJ, Correia G, Tin A, Young JH, Vergnaud A-C, Lewis M, Pearce JTM, Elliott P, Nicholson JK, Holmes E, Ebbels TMD, Blaise BJ, Correia G, Tin A, Young JH, Vergnaud A-C, Lewis M, Pearce JTM, Elliott P, Nicholson JK, Holmes E, Ebbels TMD, Blaise BJ, Correia G, Tin A, Young JH, Vergnaud AC, Lewis M, Pearce JTM, Elliott P, Nicholson JK, Holmes E, Ebbels TMD, Blaise BJ, Correia G, Tin A, Young JH, Vergnaud A-C, Lewis M, Pearce JTM, Elliott P, Nicholson JK, Holmes E, Ebbels TMD, Blaise BJ, Correia G, Tin A, Young JH, Vergnaud A-C, Lewis M, Pearce JTM, Elliott P, Nicholson JK, Holmes E, Ebbels TMD, Blaise B, Correia G, Tin A, Young J, Vergnaud A, Lewis M, Pearce J, Elliott P, Nicholson J, Holmes E, Ebbels TMD close, 2016, Power Analysis and Sample Size Determination in Metabolic Phenotyping, Analytical Chemistry, Vol:88, ISSN:0003-2700, Pages:5179-5188

David R, Ebbels T, Gooderham N, et al.David R, Ebbels T, Gooderham N, David R, Ebbels T, Gooderham N, David R, Ebbels T, Gooderham N, David R, Ebbels T, Gooderham N, David R, Ebbels T, Gooderham N, David R, Ebbels T, Gooderham N close, 2016, Synergistic and Antagonistic Mutation Responses of Human MCL-5 Cells to Mixtures of Benzo[a]pyrene and 2-Amino-1-Methyl-6-Phenylimidazo[4,5-b]pyridine: Dose-Related Variation in the Joint Effects of Common Dietary Carcinogens, Environmental Health Perspectives, Vol:124, ISSN:0091-6765, Pages:88-96

Conference

Griep LMO, Chekmeneva E, Stamler J, et al.Griep LMO, Chekmeneva E, Stamler J, Van Horn L, Chan Q, Ebbels TMD, Holmes E, Frost GS, Elliott P, Griep LMO, Chekmeneva E, Stamler J, Van Horn L, Chan Q, Ebbels TMD, Holmes E, Frost GS, Elliott P, Oude Griep LM, Chekmeneva E, Stamler J, Van Horn L, Chan Q, Ebbels TMD, Holmes E, Frost GS, Elliott P close, 2016, Urinary hippurate and proline betaine relative to fruit intake, blood pressure, and body mass index, Summer meeting 2016: New technology in nutrition research and practice, CAMBRIDGE UNIV PRESS, Pages:E178-E178, ISSN:0029-6651

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