Group XIII - IDD

Human sequence alignment
Joint human/mouse sequence alignment
Introduction
Mammalian proteins containing CTLDs
Introduction  Domain organization  Sequence alignments  Human database  Mouse database  Joint human/mouse database

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SIGNAL SEQUENCE and LDL-RECEPTOR CLASS A DOMAIN
 
IDD   MVPKADSGAFLLLFLLVLTVTEPLRPELRCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANCPE

SIGNAL SEQUENCE

 

SPACER 

IDD   VTGEVRPHHGKEAVDPRQGRARGGDPSHFHAVNVAQPVRFSSFL

 

CTLD
 
IDD   GKCPTGWHHYEGTASCYRVYLSGENYWDAAQTCQRLNGSLATFSTDQELRFVLAQEWDQPERSFGWKDQRKLWVGYQYVIT
      GRNRSLEGRWEVAFKGSSEVFLPPDPIFASAMSENDNVFCAQLQCFHFPTLRHHDLHSWHAESCYEKSSFLCKRSQ

CONSERVED CORE RESIDUES

 

VON WILLEBRAND FACTOR C DOMAIN

IDD   TCVDIKDNVVDEGFYFTPKGDDPCLSCTCHGGEPEMCVAALCERPQGCQQYRKDPKECCKFMCL

 

TRANSMEMBRANE REGION and CYTOPLASMIC DOMAIN
 
IDD   DPDGNSLFDSMASGMRLVVSCISSFLILSLLLFMVHRLRQRRRERIESLIGANLHHFNLGRRIPGFDYGPDGFGTGLTPLHLSDDGE
      GGTFHFHDPPPPYTAYKYPDIGQPDDPPPPYEASIHPDSVFYDPADDDAFEPVEVSLPAPGDGGSEGALLRRLEQPLPTAGASLADL
      EDSADSSSALLVPPDPAQSGSTPAAEALPGGGRHSRSSLNTVV 

TRANSMEMBRANE SEQUENCE 

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This page last updated:
Thursday, 09 March 2006
Animal lectins home
Contact information: This site is supported by:
 
Kurt Drickamer
Division of Molecular Biosciences
Faculty of Natural Sciences
Imperial College London
 
Email: k.drickamer@imperial.ac.uk