Publications
197 results found
Didelot X, Nell S, Yang I, et al., 2013, Genomic evolution and transmission of <i>Helicobacter pylori</i> in two South African families, PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, Vol: 110, Pages: 13880-13885, ISSN: 0027-8424
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- Citations: 85
Sheppard SK, Didelot X, Meric G, et al., 2013, Genome-wide association study identifies vitamin B<sub>5</sub> biosynthesis as a host specificity factor in <i>Campylobacter</i>, PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, Vol: 110, Pages: 11923-11927, ISSN: 0027-8424
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- Citations: 182
Golubchik T, Batty EM, Miller RR, et al., 2013, Within-Host Evolution of <i>Staphylococcus aureus</i> during Asymptomatic Carriage, PLOS ONE, Vol: 8, ISSN: 1932-6203
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- Citations: 144
Didelot X, 2013, Genomic analysis to improve the management of outbreaks of bacterial infection, EXPERT REVIEW OF ANTI-INFECTIVE THERAPY, Vol: 11, Pages: 335-337, ISSN: 1478-7210
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- Citations: 3
Read TD, Joseph SJ, Didelot X, et al., 2013, Comparative Analysis of <i>Chlamydia psittaci</i> Genomes Reveals the Recent Emergence of a Pathogenic Lineage with a Broad Host Range, MBIO, Vol: 4, ISSN: 2150-7511
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- Citations: 68
Dingle KE, Didelot X, Ansari MA, et al., 2013, Recombinational Switching of the <i>Clostridium difficile</i> S-Layer and a Novel Glycosylation Gene Cluster Revealed by Large-Scale Whole-Genome Sequencing, JOURNAL OF INFECTIOUS DISEASES, Vol: 207, Pages: 675-686, ISSN: 0022-1899
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- Citations: 74
de Muinck EJ, Lagesen K, Afset JE, et al., 2013, Comparisons of infant <i>Escherichia coli</i> isolates link genomic profiles with adaptation to the ecological niche, BMC GENOMICS, Vol: 14, ISSN: 1471-2164
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- Citations: 9
Sheppard SK, Didelot X, Jolley KA, et al., 2013, Progressive genome-wide introgression in agricultural <i>Campylobacter coli</i>, MOLECULAR ECOLOGY, Vol: 22, Pages: 1051-1064, ISSN: 0962-1083
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- Citations: 96
Price JR, Didelot X, Crook DW, et al., 2013, Whole genome sequencing in the prevention and control of <i>Staphylococcus aureus</i> infection, JOURNAL OF HOSPITAL INFECTION, Vol: 83, Pages: 14-21, ISSN: 0195-6701
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- Citations: 45
Joseph SJ, Didelot X, Rothschild J, et al., 2012, Population Genomics of <i>Chlamydia trachomatis</i>: Insights on Drift, Selection, Recombination, and Population Structure, MOLECULAR BIOLOGY AND EVOLUTION, Vol: 29, Pages: 3933-3946, ISSN: 0737-4038
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- Citations: 71
Didelot X, Bowden R, Wilson DJ, et al., 2012, Transforming clinical microbiology with bacterial genome sequencing, NATURE REVIEWS GENETICS, Vol: 13, Pages: 601-612, ISSN: 1471-0056
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- Citations: 488
Zwick ME, Joseph SJ, Didelot X, et al., 2012, Genomic characterization of the <i>Bacillus cereus</i> sensu lato species: Backdrop to the evolution of <i>Bacillus anthracis</i>, GENOME RESEARCH, Vol: 22, Pages: 1512-1524, ISSN: 1088-9051
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- Citations: 121
Zhang L, Thomas JC, Didelot X, et al., 2012, Molecular Signatures Identify a Candidate Target of Balancing Selection in an <i>arcD</i>-Like Gene of <i>Staphylococcus epidermidis</i>, JOURNAL OF MOLECULAR EVOLUTION, Vol: 75, Pages: 43-54, ISSN: 0022-2844
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- Citations: 7
Didelot X, Meric G, Falush D, et al., 2012, Impact of homologous and non-homologous recombination in the genomic evolution of <i>Escherichia coli</i>, BMC GENOMICS, Vol: 13, ISSN: 1471-2164
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- Citations: 89
Achtman M, Wain J, Weill FX, et al., 2012, Multilocus Sequence Typing as a Replacement for Serotyping in Salmonella enterica, PLoS Pathogens, Vol: 8
Moccia C, Krebes J, Kulick S, et al., 2012, The nucleotide excision repair (NER) system of <i>Helicobacter pylori</i>: Role in mutation prevention and chromosomal import patterns after natural transformation, BMC MICROBIOLOGY, Vol: 12, ISSN: 1471-2180
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- Citations: 17
Namouchi A, Didelot X, Schoeck U, et al., 2012, After the bottleneck: Genome-wide diversification of the <i>Mycobacterium tuberculosis</i> complex by mutation, recombination, and natural selection, GENOME RESEARCH, Vol: 22, Pages: 721-734, ISSN: 1088-9051
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- Citations: 109
Young BC, Golubchik T, Batty EM, et al., 2012, Evolutionary dynamics of <i>Staphylococcus aureus</i> during progression from carriage to disease, PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, Vol: 109, Pages: 4550-4555, ISSN: 0027-8424
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- Citations: 197
Cadillo-Quiroz H, Didelot X, Held NL, et al., 2012, Patterns of Gene Flow Define Species of Thermophilic Archaea, PLOS BIOLOGY, Vol: 10, ISSN: 1544-9173
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- Citations: 144
Eyre DW, Golubchik T, Gordon NC, et al., 2012, A pilot study of rapid benchtop sequencing of <i>Staphylococcus aureus</i> and <i>Clostridium difficile</i> for outbreak detection and surveillance, BMJ OPEN, Vol: 2, ISSN: 2044-6055
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- Citations: 195
Didelot X, Eyre DW, Cule M, et al., 2012, Microevolutionary analysis of <i>Clostridium difficile</i> genomes to investigate transmission, GENOME BIOLOGY, Vol: 13, ISSN: 1474-760X
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- Citations: 148
Laukkanen-Ninios R, Didelot X, Jolley KA, et al., 2011, Population structure of the <i>Yersinia pseudotuberculosis</i> complex according to multilocus sequence typing, ENVIRONMENTAL MICROBIOLOGY, Vol: 13, Pages: 3114-3127, ISSN: 1462-2912
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- Citations: 57
Gripp E, Hlahla D, Didelot X, et al., 2011, Closely related <i>Campylobacter jejuni</i> strains from different sources reveal a generalist rather than a specialist lifestyle, BMC GENOMICS, Vol: 12, ISSN: 1471-2164
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- Citations: 89
Didelot X, Bowden R, Street T, et al., 2011, Recombination and Population Structure in <i>Salmonella enterica</i>, PLOS GENETICS, Vol: 7, ISSN: 1553-7404
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- Citations: 107
Joseph SJ, Didelot X, Gandhi K, et al., 2011, Interplay of recombination and selection in the genomes of <i>Chlamydia trachomatis</i>, BIOLOGY DIRECT, Vol: 6
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- Citations: 62
Dingle KE, Griffiths D, Didelot X, et al., 2011, Clinical <i>Clostridium difficile</i>: Clonality and Pathogenicity Locus Diversity, PLOS ONE, Vol: 6, ISSN: 1932-6203
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- Citations: 136
Kennemann L, Didelot X, Aebischer T, et al., 2011, <i>Helicobacter pylori</i> genome evolution during human infection, PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, Vol: 108, Pages: 5033-5038, ISSN: 0027-8424
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- Citations: 184
Didelot X, Everitt R, Johansen A, et al., 2011, Likelihood-free estimation of model evidence, Bayesian Analysis, Vol: 6, Pages: 48-76
Didelot X, Lawson D, Darling A, et al., 2010, Inference of Homologous Recombination in Bacteria Using Whole-Genome Sequences, GENETICS, Vol: 186, Pages: 1435-U567, ISSN: 0016-6731
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- Citations: 112
Sangal V, Harbottle H, Mazzoni CJ, et al., 2010, Evolution and Population Structure of <i>Salmonella enterica</i> Serovar Newport, JOURNAL OF BACTERIOLOGY, Vol: 192, Pages: 6465-6476, ISSN: 0021-9193
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- Citations: 93
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