C elegans CTLD group 5 sequence alignment

Conserved residues are highlighted in cyan where the identity of the residue is conserved and in green where the character of the residue in preserved.

 

  1                                                                             80

   B0286.2.I    (1) ATCPKNSIYYMGSCYVFDTTLRNWNDAALYCNNMNSATLPLVESAED-QAFFAGYLQAMIPSN--PPADMRP--PPDGIW

F08G5.5b.D10    (1) SNCPVPAVNFKGLCYKMCRGLVKFEDSCTWCNGTM-ATISSGEEN--------DFVSRVFGSN--DETTR-------QIW

 C25G4.1b.E1    (1) PTCPTPTVSFNDRCYKMCRGLVKFEDSCTWCNGTM-VTVSSKEEN--------SFVSRVFGSN--DETTR-------QIW

 F10F2.5a.D4    (1) LICKSGWVQMFGRCYKITKTMMTRDKAEKHCKNQQ-DQTSTIAFM--------HREALPFRWN--DYFTRVS-----RIW

 F10F2.7a.D4    (1) LICKSGWVQMFGRCYKITKTMMTRDKAEEHCKNQQ-DQTSTIAFM--------HREALPFRWN--DYFTRVS-----RIW

 F10F2.6a.D4    (1) LICKSGWVQMFGRCYKITKTMMTRDKAEEHCKNQQ-DQTSTIAFM--------HREALPFRWN--DYFTRVS-----RIW

 F10F2.8a.D4    (1) LICKSGWVQMFGRCYKITKTMMTRDKAEEHCKNQQ-DHTSTIAFM--------HREALPFRWN--DYFTRVS-----RIW

  C25B8.4.A4    (1) GTCPDGWVRFSDSCYWIEQHKQSFAEAEKRCYEKN-ATLFVVNSQDEWDAVREHFPQTGYTWIGLVRFTHFEKSQDAPIW

  C25A1.8.A4    (1) EKCPDGWLRFADSCYWIEKELLGFAKAERNCFEKQ-STLFVANSIEEWDAIRVQAKEAFFSWIGLVRFTHYEKLEQLPRW

  K10B2.3.A4    (1) ENCPEGWIRYSDSCYWVETELLGFAKAERKCSEKQ-STLFVANSIDEWEAIRGHSKDSFSSWIGLVRFSHYERSEQLPRW

  ZK858.3.A4    (1) DRCPDGWLRYSDSCYFIETESLGFAKAERKCHDKQ-ATLFVANSMEEWDAVRDHAEKSVLSWIGLVRFSHYERLEQLPRW

   Consensus    (1)   CP GWV F G CYKI   L  F KAE  C   Q  T S             H     F WN  D FTR        IW

                    81                                                                  151

   B0286.2.I   (76) TAVRGVNNVTRASWVYYPGSFLVTDTFWAPQEPNIYVNYNDVCVALQSDSFYREWTTALCTILKY-TVCKV

F08G5.5b.D10   (63) IGNTE--SSGYLNWSQ----GQPTKPNDG-LDYCISMDLSAG--STRGKYKYLP-----CQSTVINSLCVM

 C25G4.1b.E1   (63) IGNTE--SSGYLNWSP----GQPTKPNDG-LDYCISMDLSAG--STRGKYKYLA-----CQ---K-PRCII

 F10F2.5a.D4   (65) MDASEV-VTNDLIYDVEG--GNVLLAFDG-YKYNLPNVAIAR--VSKDETAMVL--------------CEY

 F10F2.7a.D4   (65) MDASEV-VTNDLIHDVEG--GNVLLAFDG-YKYNLPNVAIAR--VSKNETAMVL--------------CEY

 F10F2.6a.D4   (65) MDASEV-ITNDLIYDIEG--GNVLLAFDG-YKYNLPNVAIAR--VPKDETAMVL--------------CEY

 F10F2.8a.D4   (65) MDASKV-ITNDLIYDIED--GNVLLAFDG-YKYNLPNVAIAR--VPKDETAMVL--------------CEY

  C25B8.4.A4   (80) QTEGAV-NPTRLNWLIRP--YKPVSNGWSALANCAAHFSAAINWDASAYTYFQP-----CSFKFY-SICER

  C25A1.8.A4   (80) QTEGAL-NPTKINWLIKP--YKPLFNGWSSLANCAASYKSPSSLESASYTYFYP-----CTYMLY-SICER

  K10B2.3.A4   (80) QTEGAV-NPSKINWLIKP--YSPLVNGWSQLANCAASYKSPASLETASYTYFYP-----CTYLFY-SICER

  ZK858.3.A4   (80) QTTGSI-NPSKINWLIKP--FKPVVNGWSSYANCAASFQSPTEVESASYTFFYP-----CTMAFK-SICER

   Consensus   (81)      V     LNW I    G PL   DG   YCL     A        T F       C        CE

 

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This page last updated:
Wednesday, 01 January 2014
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Contact information: This site is supported by:
 
Kurt Drickamer
Division of Molecular Biosciences
Faculty of Natural Sciences
Imperial College London
 
Email: k.drickamer@imperial.ac.uk