TY - JOUR AB - rfaRm is an R package providing a client-side interface for the Rfam database of non-coding RNA and other structured RNA elements. The package facilitates the search of the Rfam database by keywords or sequences, as well as the retrieval of all available information about specific Rfam families, such as member sequences, multiple sequence alignments, secondary structures and covariance models. By providing such programmatic access to the Rfam database, rfaRm enables genomic workflows to incorporate information about non-coding RNA, whose potential cannot be fully exploited just through interactive access to the database. The features of rfaRm are demonstrated by using it to analyze the SARS-CoV-2 genome as an example case. AU - Selles,Vidal L AU - Ayala,R AU - Stan,G-B AU - Ledesma-Amaro,R DO - 10.1371/journal.pone.0245280 PY - 2021/// SN - 1932-6203 TI - rfaRm: An R client-side interface to facilitate the analysis of the Rfam database of RNA families T2 - PLoS One UR - http://dx.doi.org/10.1371/journal.pone.0245280 UR - http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000609991600009&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=1ba7043ffcc86c417c072aa74d649202 UR - http://hdl.handle.net/10044/1/86424 VL - 16 ER -