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Journal articleMa J, Jiang M, Fang X, et al., 2026,
Hybrid aggregation strategy with double inverted residual blocks for lightweight salient object detection
, NEURAL NETWORKS, Vol: 194, ISSN: 0893-6080 -
Conference paperHasan MK, Yang G, Yap CH, 2026,
Motion-Enhanced Cardiac Anatomy Segmentation via an Insertable Temporal Attention Module
, Pages: 143-153, ISSN: 0302-9743Cardiac anatomy segmentation is useful for clinical assessment of cardiac morphology to inform diagnosis and intervention. Deep learning (DL), especially with motion information, has improved segmentation accuracy. However, existing techniques for motion enhancement are not yet optimal, and they have high computational costs due to increased dimensionality or reduced robustness due to suboptimal approaches that use non-DL motion registration, non-attention models, or single-headed attention. They further have limited adaptability and are inconvenient for incorporation into existing networks where motion awareness is desired. Here, we propose a novel, computationally efficient Temporal Attention Module (TAM) that offers robust motion enhancement, modeled as a small, multi-headed, cross-temporal attention module. TAM’s uniqueness is that it is a lightweight, plug-and-play module that can be inserted into a broad range of segmentation networks (CNN-based, Transformer-based, or hybrid) for motion enhancement without requiring substantial changes in the network’s backbone. This feature enables high adaptability and ease of integration for enhancing both existing and future networks. Extensive experiments on multiple 2D and 3D cardiac ultrasound and MRI datasets confirm that TAM consistently improves segmentation across a range of networks while maintaining computational efficiency and improving on currently reported performance. The evidence demonstrates that it is a robust, generalizable solution for motion-awareness enhancement that is scalable (such as from 2D to 3D). The code is available at https://github.com/kamruleee51/TAM.
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Journal articleKhalique Z, Scott AD, Ferreira PF, et al., 2025,
Diffusion Tensor CMR Assessment of the Microstructural Response to Dobutamine Stress in Health and Comparison With Patients With Recovered Dilated Cardiomyopathy.
, Circ Cardiovasc ImagingBACKGROUND: Contractile reserve assessment assesses myocardial performance and prognosis. The microstructural mechanisms that facilitate increased cardiac function have not been described, but can be studied using diffusion tensor cardiovascular magnetic resonance. Resting microstructural contractile function is characterized by reorientation of aggregated cardiomyocytes (sheetlets) from wall-parallel in diastole to a more wall-perpendicular configuration in systole, with the diffusion tensor cardiovascular magnetic resonance parameter E2A defining their orientation, and sheetlet mobility defining the angle through which they rotate. We used diffusion tensor cardiovascular magnetic resonance to identify the microstructural response to dobutamine stress in healthy volunteers and then compared with patients with recovered dilated cardiomyopathy (rDCM). METHODS: In this first-of-its-kind prospective observational study, 20 healthy volunteers and 32 patients with rDCM underwent diffusion tensor cardiovascular magnetic resonance at rest, during dobutamine, and on recovery. RESULTS: In healthy volunteers, both diastolic and systolic E2A increased with dobutamine stress (13±3° to 17±5°; P<0.001 and 59±11° to 65±7°; P=0.002). Sheetlet mobility remained unchanged (45±11° to 49±10°; P=0.19), but biphasic mean E2A increased (36±6° to 41±4°; P<0.001). In rDCM, diastolic E2A at rest was higher than in healthy volunteers (20±8° versus 13±3°, P<0.001), and sheetlet mobility was reduced (34±12° versus 45±11°; P<0.001). During dobutamine stress, rDCM diastolic and systolic E2A increased compared with rest (20±8° to 24±10°; P=0.001 and 54±13° to 63±11°; P=0.005). However, sheetlet mobility in patients with rDCM failed to increase with dobutamine to healthy levels (39±13° versus 49±
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Journal articleWang F, Wang Z, Li Y, et al., 2025,
Towards Modality- and Sampling-Universal Learning Strategies for Accelerating Cardiovascular Imaging: Summary of the CMRxRecon2024 Challenge.
, IEEE Trans Med Imaging, Vol: PPCardiovascular health is vital to human well-being, and cardiac magnetic resonance (CMR) imaging is considered the clinical reference standard for diagnosing cardiovascular disease. However, its adoption is hindered by long scan times, complex contrasts, and inconsistent quality. While deep learning methods perform well on specific CMR imaging sequences, they often fail to generalize across modalities and sampling schemes. The lack of benchmarks for high-quality, fast CMR image reconstruction further limits technology comparison and adoption. The CMRxRecon2024 challenge, attracting over 200 teams from 18 countries, addressed these issues with two tasks: generalization to unseen modalities and robustness to diverse undersampling patterns. We introduced the largest public multi-modality CMR raw dataset, an open benchmarking platform, and shared code. Analysis of the best-performing solutions revealed that prompt-based adaptation and enhanced physics-driven consistency enabled strong cross-scenario performance. These findings establish principles for generalizable reconstruction models and advance clinically translatable AI in cardiovascular imaging.
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Journal articleMa X, Tao Y, Zhang Z, et al., 2025,
Test-time generative augmentation for medical image segmentation.
, Med Image Anal, Vol: 109Medical image segmentation is critical for clinical diagnosis, treatment planning, and monitoring, yet segmentation models often struggle with uncertainties stemming from occlusions, ambiguous boundaries, and variations in imaging devices. Traditional test-time augmentation (TTA) techniques typically rely on predefined geometric and photometric transformations, limiting their adaptability and effectiveness in complex medical scenarios. In this study, we introduced Test-Time Generative Augmentation (TTGA), a novel augmentation strategy specifically tailored for medical image segmentation at inference time. Different from conventional augmentation strategies that suffer from excessive randomness or limited flexibility, TTGA leverages a domain-fine-tuned generative model to produce contextually relevant and diverse augmentations tailored to the characteristics of each test image. Built upon diffusion model inversion, a masked null-text inversion method is proposed to enable region-specific augmentations during sampling. Furthermore, a dual denoising pathway is designed to balance precise identity preservation with controlled variability. We demonstrate the efficacy of our TTGA through extensive experiments across three distinct segmentation tasks spanning nine datasets. Our results consistently demonstrate that TTGA not only improves segmentation accuracy (with DSC gains ranging from 0.1 % to 2.3 % over the baseline) but also offers pixel-wise error estimation (with DSC gains ranging from 1.1 % to 29.0 % over the baseline). The source code and demonstration are available at: https://github.com/maxiao0234/TTGA.
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Journal articleJin W, Tian X, Wang N, et al., 2025,
Representation-driven sampling and adaptive policy resetting for improving multi-Agent reinforcement learning
, NEURAL NETWORKS, Vol: 192, ISSN: 0893-6080 -
Journal articleHao P, Wang H, Yang G, et al., 2025,
Enhancing Visual Reasoning With LLM-Powered Knowledge Graphs for Visual Question Localized-Answering in Robotic Surgery.
, IEEE J Biomed Health Inform, Vol: 29, Pages: 9027-9040Expert surgeons often have heavy workloads and cannot promptly respond to queries from medical students and junior doctors about surgical procedures. Thus, research on Visual Question Localized-Answering in Surgery (Surgical-VQLA) is essential to assist medical students and junior doctors in understanding surgical scenarios. Surgical-VQLA aims to generate accurate answers and locate relevant areas in the surgical scene, requiring models to identify and understand surgical instruments, operative organs, and procedures. A key issue is the model's ability to accurately distinguish surgical instruments. Current Surgical-VQLA models rely primarily on sparse textual information, limiting their visual reasoning capabilities. To address this issue, we propose a framework called Enhancing Visual Reasoning with LLM-Powered Knowledge Graphs (EnVR-LPKG) for the Surgical-VQLA task. This framework enhances the model's understanding of the surgical scenario by utilizing knowledge graphs of surgical instruments constructed by the Large Language Model (LLM). Specifically, we design a Fine-grained Knowledge Extractor (FKE) to extract the most relevant information from knowledge graphs and perform contrastive learning with the extracted knowledge graphs and local image. Furthermore, we design a Multi-attention-based Surgical Instrument Enhancer (MSIE) module, which employs knowledge graphs to obtain an enhanced representation of the corresponding surgical instrument in the global scene. Through the MSIE module, the model can learn how to fuse visual features with knowledge graph text features, thereby strengthening the understanding of surgical instruments and further improving visual reasoning capabilities. Extensive experimental results on the EndoVis-17-VQLA and EndoVis-18-VQLA datasets demonstrate that our proposed method outperforms other state-of-the-art methods. We will release our code for future research.
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Journal articleWang Z, Xiao M, Zhou Y, et al., 2025,
Deep Separable Spatiotemporal Learning for Fast Dynamic Cardiac MRI.
, IEEE Trans Biomed Eng, Vol: 72, Pages: 3642-3654OBJECTIVE: Dynamic magnetic resonance imaging (MRI) plays an indispensable role in cardiac diagnosis. To enable fast imaging, the k-space data can be undersampled but the image reconstruction poses a great challenge of high-dimensional processing. This challenge necessitates extensive training data in deep learning reconstruction methods. In this work, we propose a novel and efficient approach, leveraging a dimension-reduced separable learning scheme that can perform exceptionally well even with highly limited training data. METHODS: We design this new approach by incorporating spatiotemporal priors into the development of a Deep Separable Spatiotemporal Learning network (DeepSSL), which unrolls an iteration process of a 2D spatiotemporal reconstruction model with both temporal low-rankness and spatial sparsity. Intermediate outputs can also be visualized to provide insights into the network behavior and enhance interpretability. RESULTS: Extensive results on cardiac cine datasets demonstrate that the proposed DeepSSL surpasses state-of-the-art methods both visually and quantitatively, while reducing the demand for training cases by up to 75%. Additionally, its preliminary adaptability to unseen cardiac patients has been verified through a blind reader study conducted by experienced radiologists and cardiologists. Furthermore, DeepSSL enhances the accuracy of the downstream task of cardiac segmentation and exhibits robustness in prospectively undersampled real-time cardiac MRI. CONCLUSION: DeepSSL is efficient under highly limited training data and adaptive to patients and prospective undersampling. SIGNIFICANCE: This approach holds promise in addressing the escalating demand for high-dimensional data reconstruction in MRI applications.
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Journal articleWang H, Chen Y, Chen W, et al., 2025,
Serp-Mamba: Advancing High-Resolution Retinal Vessel Segmentation With Selective State-Space Model.
, IEEE Trans Med Imaging, Vol: 44, Pages: 4811-4825Ultra-Wide-Field Scanning Laser Ophthalmoscopy (UWF-SLO) images capture high-resolution views of the retina with typically spanning 200 degrees. Accurate segmentation of vessels in UWF-SLO images is essential for detecting and diagnosing fundus disease. Recent studies highlight that Mamba's selective State Space Model (SSM) excels in modeling long-range dependencies with linear computational complexity, making it highly suitable for preserving the continuity of elongated vessel structures, especially for high-resolution UWF images. Inspired by this, we propose the Serpentine Mamba (Serp-Mamba) network to address this challenging task. Specifically, we recognize the intricate, varied, and delicate nature of the tubular structure of vessels. Furthermore, the high-resolution of UWF-SLO images exacerbates the imbalance between the vessel and background categories. Based on the above observations, we first devise a Serpentine Interwoven Adaptive (SIA) scan mechanism, which scans UWF-SLO images along curved vessel structures in a snake-like crawling manner. This approach, consistent with vascular texture transformations, ensures the effective and continuous capture of curved vascular structure features. Second, we propose an Ambiguity-Driven Dual Recalibration (ADDR) module to address the category imbalance problem intensified by high-resolution images. Our ADDR module delineates pixels by two learnable thresholds and refines ambiguous pixels through a dual-driven strategy, thereby accurately distinguishing vessels and background regions. Experiment results on three datasets demonstrate the superior performance of our Serp-Mamba on high-resolution vessel segmentation. We also conduct a series of ablation studies to verify the impact of our designs. Our code will be released upon publication (https://github.com/whq-xxh/Serp-Mamba).
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Journal articleHalliday BP, Owen R, Ragavan A, et al., 2025,
A double-blind, randomized placebo-controlled trial examining the effect of MitoQ on myocardial energetics in patients with dilated cardiomyopathy
, EUROPEAN HEART JOURNAL-CARDIOVASCULAR IMAGING, ISSN: 2047-2404
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Contact
For enquiries about the MRI Physics Collective, please contact:
Mary Finnegan
Senior MR Physicist at the Imperial College Healthcare NHS Trust
Pete Lally
Assistant Professor in Magnetic Resonance (MR) Physics at Imperial College
Jan Sedlacik
MR Physicist at the Robert Steiner MR Unit, Hammersmith Hospital Campus