Software - CellProfiler
CellProfiler
Open-source software for quantitative analysis of biological images.
- Automated analysis
- Can measure multiple properties at once
- No prior experience in programming required
- Can be run in batch mode to automate large scale analyses (see details here).
- Compatible with Windows, Mac and Linux
- Interfaces with ImageJ, Ilastik, OMERO, KNIME, and others
- Opens 180+ file formats
Source:
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Using CellProfiler
Human cells
Drosophila cells
Tumours
Comet assay
Counting and scoring
Yeast colony classification
Yeast patch identification
Tissue neighbours
Wound healing
Illumination correction
Colocalisation analysis
Human cytoplasm-nucleus translocation
Imaging flow cytometry
Speckle counting
Object tracking
Worm toolbox